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Analyses
Different analyses available on One Codex and how we analyze your samples
10 articles in this collection
Written by
Denise Lynch
COVID-19 Outbreak
COVID-19 Sequencing Analysis
Test your samples for SARS-CoV-2
Written by
Denise Lynch
Updated over a week ago
Analyses on One Codex
Metagenomic classification
Analyzing whole genome sequencing (WGS) and targeted sequencing (e.g., 16S) data on One Codex
Written by
Denise Lynch
Updated over a week ago
Panels
Evaluating the presence of anti-microbial resistance (AMR) genes, virulence factors, and other functional markers
Written by
Denise Lynch
Updated over a week ago
Functional Analysis
Describes the Functional Analysis and how it works, giving a walkthrough of the resulting report.
Written by
Denise Lynch
Updated over a week ago
One Codex Alignments
An Introduction to One Codex Alignments, and How to Run Them
Written by
Denise Lynch
Updated over a week ago
Running analyses
How to manually kick off additional analyses for your samples
Written by
Denise Lynch
Updated over a week ago
Comparing Samples
Compare Abundances with Quick Compare
Written by
Denise Lynch
Updated over a week ago
Clustering
Reference-free comparison of your samples by whole genome clustering
Written by
Denise Lynch
Updated over a week ago
Visualizing microbiome data with Custom Plots
Learn how to compare samples and make common microbiome plots on the One Codex Platform
Written by
Denise Lynch
Updated over a week ago
Exporting Results Tables
Easily download excel tables of your classification data
Written by
Denise Lynch
Updated over a week ago