One Codex

Introduction to Workflows

A Guide to creating or importing your own workflows on One Codex

Creating Your Workflows

Learn how to use the outputs of one workflow as inputs for another.

Dependencies Between Workflows

Learn about the different states a workflow can be in, and what each of those states allow.

Workflow States and Permissions

Launching Your Workflows

Learn how to set your parameters when launching your workflows

Setting Workflow Arguments at Launch

Viewing Run Details and Results for Workflows

Organizations can connect their One Codex accounts directly to their GitHub repositories, to make it easier to run your Workflows

GitHub Integration

Tutorial: Creating and Running a Nextflow Pipeline on One Codex Workflows

Learn how to access the One Codex API from within a running workflow

Accessing the One Codex API within Workflows

Denise Lynch

Austin Davis-Richardson

Your team can develop and run your own workflows on One Codex

Your Authored Workflows on One Codex

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Create your workspace and invite the people you work with.

Set up your account

Build your first workflow and watch it run end to end.

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Connect the tools your team already uses to bring data in.

Connect your stack

A quick lap of the product so you know where everything lives.

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Because you already asked about invitations, this prototype demo can add the follow-up: use the role selector before sending each invite to limit access to the teammate responsibilities.

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This prototype demo suggests starting with your workspace profile, inviting the team members who need access, and then connecting the integrations you use.

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In this prototype demo, integrations are configured from workspace settings. Choose the integration, connect the account, and review the enabled permissions.

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In this prototype demo, invite teammates from workspace settings, then choose the access each teammate needs before sending the invitation.

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